Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs139053973 chr10:43417218 GCTAT/G 4.94E-5 288 25.93 24.57 11.43 KM Plot
KIRP rs139065679 chr9:96531003 C/CTGCCTTGGCTTTCAACA 0.000149 280 25.62 27.47 13.17 KM Plot
KIRP rs139069106 chr16:8709452 A/AAAAC 9.12E-5 282 5.72 31.57 25.5 KM Plot
KIRP rs139286267 chr11:47064211 TA/T 7.93E-12 288 25.57 28.03 10.82 KM Plot
KIRP rs139302892 chr17:80803331 C/T 1.11E-8 280 26.28 22.8 16.4 KM Plot
KIRP rs1393208 chr5:156477725 G/A 1.38E-7 287 12.78 22.57 26.37 KM Plot
KIRP rs1393209 chr5:156477540 G/A 1.01E-7 286 12.78 22.47 26.37 KM Plot
KIRP rs139470589 chr14:54918337 CCTGCA/C 3.11E-7 283 25.93 29.77 9 KM Plot
KIRP rs139624725 chr6:27317016 AC/A 1.88E-8 287 25.58 27.78 9.77 KM Plot
KIRP rs139641031 chr12:49866394 T/TTATA 2.33E-6 282 25.63 37.25 10.97 KM Plot
KIRP rs139663751 chr15:57592557 C/T 1.49E-6 286 25.62 27.6 7.28 KM Plot
KIRP rs139681995 chr21:44256346 C/CT 0.000156 284 25.53 37.87 13.07 KM Plot
KIRP rs139727222 chr4:16174144 TC/T 8.86E-7 279 25.23 28.92 15.7 KM Plot
KIRP rs139819326 chr8:24958851 C/G 1.05E-11 284 26.38 19.9 9.77 KM Plot
KIRP rs139986249 chr17:30314082 TTG/T 1.37E-9 284 26.07 23.85 10.88 KM Plot